Information for 15-CGCACATGCGGGACAG (Motif 23)

A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A T C G A C G T A G T C A G T C A G T C A C T G A G T C C G T A A C G T A T C G A G C T A T C G A G T C A C T G
p-value:1e-8
log p-value:-2.020e+01
Information Content per bp:1.918
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.8 +/- 23.4bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CGCACATGCGGGACAG
----TATGCGGGTA--
 A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A A C G T A C G T

PAX9/MA0781.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGCACATGCGGGACAG
TGCAGTCATGCGTGACG-
 A C G T A C G T A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
C A G T A C T G G T A C C T G A A T C G A G C T A T G C C T G A C G A T A T C G A G T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGCACATGCGGGACAG-
-NNNNATGCGGGTNNNN
 A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G A C G T
A C G T G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PAX1/MA0779.1/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CGCACATGCGGGACAG
NGCANTCATGCGTGACG-
 A C G T A C G T A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
C A G T A C T G G T A C C T G A A T C G A G C T T A G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A G T A C T A C G A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:forward strand
Alignment:CGCACATGCGGGACAG
------GGCGGGAARN
 A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

SPDEF/MA0686.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCACATGCGGGACAG
--TACATCCGGGT---
 A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
A C G T A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGCACATGCGGGACAG
----CATGCGGGTAC-
 A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T

NRF(NRF)/Promoter/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CGCACATGCGGGACAG
GTGCGCATGCGC-----
 A C G T A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:forward strand
Alignment:CGCACATGCGGGACAG
-----GGGCGGGAAGG
 A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G
A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:10
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:CGCACATGCGGGACAG--
------TGAGTGACAGSC
 A G T C C T A G A T G C C T G A A T G C C G T A A C G T C T A G A G T C A C T G A C T G A C T G C G T A A T G C C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C