Information for 1-CYCCTGGTGKTGA (Motif 1)

A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A G T A C A G T C T G C A A T G C A G T C C G T A C T A G A C T G T C G A A T C G
p-value:1e-13
log p-value:-3.129e+01
Information Content per bp:1.749
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif135.5
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets53.2 +/- 28.5bp
Average Position of motif in Background53.3 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL002.1_INR/Jaspar

Match Rank:1
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CYCCTGGTGKTGA
-----NNNANTGA
 A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T C G A T C G A C T A G C T G A T A G C C G A T A C T G G T C A

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CYCCTGGTGKTGA----
-----GGTGYTGACAGS
 A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.56
Offset:-7
Orientation:forward strand
Alignment:-------CYCCTGGTGKTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

EBF1/MA0154.3/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CYCCTGGTGKTGA
ANTCCCTNGGGAAT--
 A C G T A C G T A C G T A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CYCCTGGTGKTGA
CCCCCTGCTGTG--
 A C G T A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.54
Offset:-7
Orientation:reverse strand
Alignment:-------CYCCTGGTGKTGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CYCCTGGTGKTGA
NNCACCTGNN-----
 A C G T A C G T A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T A C G T A C G T A C G T A C G T

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CYCCTGGTGKTGA
TCCCCTGGGGAC--
 A C G T A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CYCCTGGTGKTGA----
--GCTGACCTTGAACTN
 A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------CYCCTGGTGKTGA
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G C T A G T C G A T C A C G T A C T G T A C G A C G T C T A G C A T G A C G T A C T G C G T A
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A