Information for 4-GTGGTCMGTGATGTGT (Motif 9)

A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T
Reverse Opposite:
C T G A A G T C G T C A A T G C C G T A A C G T A G T C G T C A A G T C A C G T C T A G C T G A A G T C G A T C C G T A A T G C
p-value:1e-10
log p-value:-2.331e+01
Information Content per bp:1.709
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.6 +/- 18.6bp
Average Position of motif in Background58.7 +/- 18.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GTGGTCMGTGATGTGT--
------GGGGGTGTGTCC
 A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCMGTGATGTGT
AGRGGTCA---------
 A C G T A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GTGGTCMGTGATGTGT
---CCCCCTGCTGTG-
 A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T
A C G T A C G T A C G T G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:4
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:GTGGTCMGTGATGTGT
NAGGTCANTGACCT--
 A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GTGGTCMGTGATGTGT
GGCGAGGGGTCAAGGGC----
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T A C G T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:GTGGTCMGTGATGTGT--
-NNNNNATTGATGNGTGN
 A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GTGGTCMGTGATGTGT
-AGGTCA---------
 A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T
A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer

Match Rank:8
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-GTGGTCMGTGATGTGT---
NGTGTTCAVTSAAGCGKAAA
 A C G T A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T A C G T A C G T A C G T
A G C T T A C G C G A T T C A G A G C T A C G T G A T C C T G A T A G C A G C T A T G C C T G A C G T A A T C G A G T C C T A G A C T G C T G A G T C A T C G A

PB0057.1_Rxra_1/Jaspar

Match Rank:9
Score:0.49
Offset:-5
Orientation:reverse strand
Alignment:-----GTGGTCMGTGATGTGT
NTNNNGGGGTCANGNNN----
 A C G T A C G T A C G T A C G T A C G T A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GTGGTCMGTGATGTGT--
---NNTCCTGCTGTGNNN
 A T C G A C G T C A T G A C T G A G C T A G T C T G C A T C A G A C G T C T A G C G T A A C G T A T C G A C G T A C T G A G C T A C G T A C G T
A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C