Information for 18-RWGCCCAAGWCAA (Motif 29)

C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A A G T C A C G T A C G T A C T G A C T G A C T G A G T C C G T A G A C T
p-value:1e-6
log p-value:-1.430e+01
Information Content per bp:1.890
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.7 +/- 23.9bp
Average Position of motif in Background34.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0133.1_Hic1_2/Jaspar

Match Rank:1
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----RWGCCCAAGWCAA
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RWGCCCAAGWCAA
----AAAAGTCAA
 C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A
A C G T A C G T A C G T A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:RWGCCCAAGWCAA----
-TGCCAAAATAAACANN
 C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T C G A T A C T G T A G C G T A C C G T A C T G A C T G A C T G A G A C T G T C A G T C A C T G A A G T C C G T A C T G A G C T A

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:RWGCCCAAGWCAA
-AGCCTCAGGCA-
 C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:RWGCCCAAGWCAA
-AGCCTCAGGCA-
 C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A
A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

HIC2/MA0738.1/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:RWGCCCAAGWCAA
ATGCCCACC----
 C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RWGCCCAAGWCAA-
ANTGCCTGAGGCAAN
 A C G T C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RWGCCCAAGWCAA
-CGCCTCAGGCA-
 C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A
A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-RWGCCCAAGWCAA-
ATTGCCTGAGGCAAT
 A C G T C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:RWGCCCAAGWCAA
-TGCCCAGNHW--
 C T A G C G A T A C T G A G T C A G T C A G T C C G T A C G T A A C T G G C A T A G T C G T C A C G T A
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T