Information for 14-CCGGCTTGGCTSG (Motif 24)

A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
Reverse Opposite:
G T A C T A G C G T C A A C T G A G T C G T A C T G C A T C G A C T A G A T G C G T A C T A C G A C T G
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.748
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif71.6
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets52.1 +/- 24.7bp
Average Position of motif in Background50.0 +/- 25.7bp
Strand Bias (log2 ratio + to - strand density)2.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:1
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCGGCTTGGCTSG--
GGGGCTYGKCTGGGA
 A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G A C G T A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGGCTTGGCTSG
GTCATGCHTGRCTGS
 A C G T A C G T A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCGGCTTGGCTSG
----NTTGGCANN
 A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CCGGCTTGGCTSG
-----TTGGCA--
 A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGGCTTGGCTSG----
--GGNGCGNCTGTTNNN
 A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:CCGGCTTGGCTSG
-------NGCTN-
 A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCTTGGCTSG
NGTCACGCTTGGCTGC
 A C G T A C G T A C G T A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
C T A G A C T G A G C T A G T C G T C A G A T C T C A G A T G C G C A T G A C T A T C G T C A G T A G C G A C T C T A G T G A C

SP4/MA0685.1/Jaspar

Match Rank:8
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCGGCTTGGCTSG
NAAGGGGGCGTGGCTTN
 A C G T A C G T A C G T A C G T A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCGGCTTGGCTSG
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCGGCTTGGCTSG
MKGGGYGTGGCC--
 A C G T A G T C A T G C A C T G A T C G A G T C A G C T A C G T A C T G A C T G A G T C A C G T A T C G A C T G
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C A C G T A C G T