Information for 8-CCGCCTGCAG (Motif 22)

A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G
Reverse Opposite:
A G T C A G C T A C T G A G T C G T C A A C T G A T C G A T G C T C A G A T C G
p-value:1e-7
log p-value:-1.773e+01
Information Content per bp:1.853
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif416.7
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets57.0 +/- 22.4bp
Average Position of motif in Background49.5 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CCGCCTGCAG---
GGCCYCCTGCTGDGH
 A C G T A C G T A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G A C G T A C G T A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CCGCCTGCAG--
CCCCCTGCTGTG
 A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G A C G T A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:3
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCGCCTGCAG
SNGCACCTGCHS
 A C G T A C G T A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G
T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ZIC4/MA0751.1/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCGCCTGCAG---
GACCCCCCGCTGTGC
 A C G T A C G T A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G A C G T A C G T A C G T
A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CCGCCTGCAG---
---CCTGCTGAGH
 A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A

ZIC3/MA0697.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCGCCTGCAG---
GACCCCCCGCTGCGC
 A C G T A C G T A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G A C G T A C G T A C G T
A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCGCCTGCAG-----
TNTCCTGCTGTGNNG
 A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

ZIC1/MA0696.1/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGCCTGCAG--
GACCCCCCGCTGTG
 A C G T A C G T A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G A C G T A C G T
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCGCCTGCAG-----
TCNCCTGCTGNGNNN
 A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G A C G T A C G T A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCGCCTGCAG
NNCACCTGNN-
 A C G T A T G C A G T C A T C G A T G C A G T C C A G T A C T G A G T C T C G A C T A G
A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A A C G T