Information for 9-CACCCACCAGCCA (Motif 15)

A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A
Reverse Opposite:
A C G T A C T G A C T G A G T C A C G T A C T G A C T G A C G T A T C G A C T G A C T G A G C T A T C G
p-value:1e-8
log p-value:-2.016e+01
Information Content per bp:1.903
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets58.5 +/- 30.0bp
Average Position of motif in Background48.9 +/- 33.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:CACCCACCAGCCA-
------BCAGACWA
 A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CACCCACCAGCCA
ATTTCCCAGVAKSCY
 A C G T A C G T A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CACCCACCAGCCA-
------CCAGACAG
 A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CACCCACCAGCCA--
---GGACCACCCACG
 A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

RREB1/MA0073.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CACCCACCAGCCA------
CCCCAAACCACCCCCCCCCA
 A C G T A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
G T A C G T A C G T A C A G T C G T C A G T C A G T C A G T A C A G T C C G T A G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C T A G C T G A C

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACCCACCAGCCA-----
-TACGCCCCGCCACTCTG
 A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CACCCACCAGCCA
-------CAGCC-
 A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CACCCACCAGCCA
-SNGCACCTGCHS
 A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

ZEB1/MA0103.2/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACCCACCAGCCA
-CCTCACCTG---
 A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A
A C G T T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CACCCACCAGCCA-----
-CAAATCCAGACATCACA
 A T G C C T G A A G T C G T A C A T G C G T C A A G T C A G T C C G T A A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A