Information for 24-GTTTTCAACCATCAGA (Motif 36)

A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C A C G T A C T G C G T A A C G T A C T G A C T G A C G T A C G T A C T G C G T A C G T A C G T A C G T A A G T C
p-value:1e-6
log p-value:-1.432e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.40%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.7 +/- 15.4bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0134.1_Pbx1/Jaspar

Match Rank:1
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTTTTCAACCATCAGA-----
----TCACCCATCAATAAACA
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GTTTTCAACCATCAGA
---GYCATCMATCAT-
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
A C G T A C G T A C G T T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer

Match Rank:3
Score:0.53
Offset:5
Orientation:forward strand
Alignment:GTTTTCAACCATCAGA
-----AAACMATTAN-
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T C G A C T G A C T G A A T G C G T A C G T C A A G C T A G C T C G T A T C A G A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GTTTTCAACCATCAGA
CGGTTTCAAA-------
 A C G T A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GTTTTCAACCATCAGA
-TTTTCCA--------
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:forward strand
Alignment:GTTTTCAACCATCAGA
ATTTTCCATT------
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

PBX1/MA0070.1/Jaspar

Match Rank:7
Score:0.50
Offset:4
Orientation:forward strand
Alignment:GTTTTCAACCATCAGA
----CCATCAATCAAA
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T G A T C A G T C T C G A G A C T A G T C G T C A C G T A A C G T A G T C G C T A C G T A C G T A

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GTTTTCAACCATCAGA-----
-GCCTCCTCCMTCWGACTGKS
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.49
Offset:4
Orientation:forward strand
Alignment:GTTTTCAACCATCAGA
----TCATCAATCA--
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
A C G T A C G T A C G T A C G T G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T

PB0062.1_Sox12_1/Jaspar

Match Rank:10
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:GTTTTCAACCATCAGA
NTTNAGAACAATTA--
 A C T G A C G T A C G T A C G T A C G T A G T C C G T A C G T A A G T C A G T C C G T A A C G T A G T C C G T A A C T G C G T A
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A A C G T A C G T