Information for 3-GAGAATTATT (Motif 22)

C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T
Reverse Opposite:
G T C A C T G A G A C T C T G A C G T A A C G T A G C T G A T C C G A T G T A C
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.834
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif268.9
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets54.4 +/- 22.5bp
Average Position of motif in Background53.4 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.84
Offset:3
Orientation:reverse strand
Alignment:GAGAATTATT
---AATTATT
 C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T
A C G T A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T

PB0165.1_Sox11_2/Jaspar

Match Rank:2
Score:0.74
Offset:1
Orientation:forward strand
Alignment:GAGAATTATT-----
-AAAATTGTTATGAA
 C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PB0175.1_Sox4_2/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAGAATTATT-----
GGAAAAATTGTTAGGAA
 A C G T A C G T C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PH0022.1_Dlx3/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---GAGAATTATT----
NNNGGTAATTATNGNGN
 A C G T A C G T A C G T C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A

PH0023.1_Dlx4/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GAGAATTATT----
GTCGGTAATTATNGNGN
 A C G T A C G T A C G T C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T
C A T G C G A T A T G C C A T G A C T G G A C T C G T A C G T A A C G T G C A T C T G A G A C T G T C A A C T G A G T C C A T G T G A C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGAATTATT--
GTTAATNATTAA
 C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T A C G T A C G T
C T A G A C G T G C A T T C G A G T C A G C A T A T C G C G T A C A G T A G C T C T G A T G C A

PB0067.1_Sox18_1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGAATTATT------
TTCAATTGTTCTAAAA
 C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G C A T A G T C G T C A C G T A C G A T C G A T T C A G C G A T G C A T A G T C G C A T G T C A C G T A G T C A G C T A

PB0197.1_Zfp105_2/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GAGAATTATT-------
NAAANTTATTGAANCAN
 C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C G T C A T C G A G T C A T C G A C G A T A G C T T C G A A C G T A C G T A C T G T C G A T G C A A G T C G T A C T C G A G A C T

Dlx1/MA0879.1/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGAATTATT
CCTAATTATC
 C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T
T G A C T G A C G A C T T G C A G C T A C G A T A C G T G C T A A C G T A T G C

Dlx2/MA0885.1/Jaspar

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GAGAATTATT
-GCAATTAA-
 C A T G C G T A C T A G C T G A C G T A A C G T G A C T C T G A A G C T A C G T
A C G T T A C G G A T C G T C A G T C A A C G T A C G T C G T A G C T A A C G T