Information for 9-AGAACTGACCCAT (Motif 20)

C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A C G A T C T A G A C T G A T C G C G A T A G T C C G T A A C T G A G C T A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.222e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.0 +/- 19.6bp
Average Position of motif in Background31.7 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:1
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:AGAACTGACCCAT
-----TGACCT--
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:AGAACTGACCCAT
-----TGACCYCT
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

JUN(var.2)/MA0489.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAACTGACCCAT
AGGAGATGACTCAT
 A C G T C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T
C T G A C T A G C T A G C T G A C T A G T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A A C G T

FOS/MA0476.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGAACTGACCCAT-
---TGTGACTCATT
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C A G T T A C G A C G T A C T G C G T A A T G C A C G T A G T C C G T A A G C T A G C T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AGAACTGACCCAT--
-----TGACCTARTT
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAACTGACCCAT----
NNNNTTGACCCCTNNNN
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

JUND/MA0491.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:AGAACTGACCCAT-
---GGTGACTCATC
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T C T A G T C A G A C G T A C T G C G T A A T G C A C G T G T A C C G T A A G C T T A G C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AGAACTGACCCAT----
NNANTTGACCCCTNNNN
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGAACTGACCCAT-
----ATGACTCATC
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

RORA(var.2)/MA0072.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:AGAACTGACCCAT-----
----TTGACCTANTTATN
 C G T A A C T G C G T A C T G A A G T C A C G T A C T G C G T A A T G C A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A