Information for 6-CTCAGGACAGGCT (Motif 11)

A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G A G T C A G T C A C G T A C T G A C G T A G T C A G T C C G A T A C T G C G T A A C T G
p-value:1e-11
log p-value:-2.567e+01
Information Content per bp:1.907
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.4 +/- 23.7bp
Average Position of motif in Background55.0 +/- 0.8bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCAGGACAGGCT
-TRAGGTCA----
 A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:2
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CTCAGGACAGGCT
TCACCTCTGGGCAG---
 A C G T A C G T A C G T A C G T A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
G A C T G T A C C T G A A G T C G A T C A G C T A T G C G C A T C T A G C T A G C A T G A G T C C G T A A C T G A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTCAGGACAGGCT
GCCTCAGGGCAT---
 A C G T A C G T A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCAGGACAGGCT
CAAAGGTCAG---
 A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CTCAGGACAGGCT
SCCTSAGGSCAW---
 A C G T A C G T A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
A T C G A G T C A G T C G A C T A T G C C T G A C T A G A C T G T A C G G T A C C T G A C G A T A C G T A C G T A C G T

THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer

Match Rank:6
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------CTCAGGACAGGCT
GGTCANYTGAGGWCA----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
C T A G C A T G A C G T A G T C G C T A A G C T A G T C A G C T T C A G C T G A A C T G C A T G G C A T A T G C C G T A A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:CTCAGGACAGGCT
-----CACAGN--
 A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:CTCAGGACAGGCT-
---------NGCTN
 A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTCAGGACAGGCT
---TTGACAGC--
 A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:10
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCAGGACAGGCT----
--VAGRACAKNCTGTBC
 A G T C A C G T G T A C C G T A A C T G A C T G G T C A A G T C G T C A C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C