Information for 3-TGAGTTAVHTTTATTG (Motif 5)

C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G A T C T G A C T G A C G T A C G T A A G T C A G C T C G T A C G T A A G T C C G A T A G T C C G T A
p-value:1e-13
log p-value:-3.169e+01
Information Content per bp:1.812
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets73.0 +/- 12.8bp
Average Position of motif in Background44.3 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0078.1_Hoxd13/Jaspar

Match Rank:1
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG----
----NNANTTTTATTGGNNN
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG----
---NTNAATTTTATTGNATT
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:3
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG-
-------NTTTTATTGG
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G

HOXA13/MA0650.1/Jaspar

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG-
-------TTTTTATTGG
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G

CDX1/MA0878.1/Jaspar

Match Rank:5
Score:0.58
Offset:8
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG-
--------TTTTATTGC
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.57
Offset:8
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG---
--------TTTTATGGCTN
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

PH0057.1_Hoxb13/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG----
----NNAATTTTATTGGNTN
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG-
-------NTTTTATTGG
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G

PH0013.1_Cdx2/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG-----
-----NAATTTTATTACCNNN
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGAGTTAVHTTTATTG----
----TNAATTTTATTACCTN
 C G A T A C T G C G T A A C T G C G A T A C G T C T G A T A C G G A C T A C G T A G C T A G C T C G T A A C G T C G A T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A