Information for 7-CTCTAGTGGA (Motif 33)

G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A
Reverse Opposite:
A G C T A G T C G T A C G C T A A T G C G C A T C T G A A T C G T G C A C A T G
p-value:1e-7
log p-value:-1.737e+01
Information Content per bp:1.669
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.89%
Number of Background Sequences with motif563.2
Percentage of Background Sequences with motif1.16%
Average Position of motif in Targets46.6 +/- 26.2bp
Average Position of motif in Background49.7 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTCTAGTGGA
BTBRAGTGSN
 G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:CTCTAGTGGA-
-----GTGGAT
 G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTCTAGTGGA---
NANTTTCAAGTGGTTAN
 A C G T A C G T A C G T A C G T G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

NKX2-8/MA0673.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTCTAGTGGA
NTCAAGTGG-
 G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A
A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTCTAGTGGA
NTCAAGTGGN
 G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCTAGTGGA---
AANTTCAAGTGGCTTN
 A C G T A C G T A C G T G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A A C G T A C G T A C G T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

PH0114.1_Nkx2-5/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---CTCTAGTGGA---
AAATTCAAGTGGNTTN
 A C G T A C G T A C G T G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A A C G T A C G T A C G T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCTAGTGGA
CTYRAGTGSY
 G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CTCTAGTGGA---
AATTTCAAGTGGCTTN
 A C G T A C G T A C G T G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A A C G T A C G T A C G T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

SPIB/MA0081.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:CTCTAGTGGA-
----AGAGGAA
 G T A C A C G T T A G C G A C T C G T A T A C G C G A T C A T G T C A G T C G A A C G T
A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A