Information for 18-AGATTACTGCTGA (Motif 30)

C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
Reverse Opposite:
C G A T G A T C C G T A T A C G G T A C C G T A C A T G C G A T C G T A C G T A A C G T A T G C A C G T
p-value:1e-8
log p-value:-1.931e+01
Information Content per bp:1.804
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets38.7 +/- 11.1bp
Average Position of motif in Background57.1 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGATTACTGCTGA
RGGATTAR------
 A C G T C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AGATTACTGCTGA
-AATTAGTG----
 C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
A C G T T G C A C G T A A G C T C G A T G C T A T A C G G A C T A C T G A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGATTACTGCTGA
NGGATTAA------
 A C G T C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AGATTACTGCTGA
CGGATTAN------
 A C G T C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGATTACTGCTGA----
--AAAWWTGCTGACWWD
 C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AGATTACTGCTGA
GGGATTAA------
 A C G T C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGATTACTGCTGA
GNGGATTAGN-----
 A C G T A C G T C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGATTACTGCTGA
VRGGATTARN-----
 A C G T A C G T C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T A C G T

PB0185.1_Tcf1_2/Jaspar

Match Rank:9
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------AGATTACTGCTGA
TTGCCCGGATTAGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
C G A T A C G T T C A G G A T C T A G C A G T C T A C G A C T G C T G A C A G T A C G T C G T A C A T G C T A G A C G T A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGATTACTGCTGA
NNGGATTAGN-----
 A C G T A C G T C G T A T A C G C G T A A C G T A C G T C G T A G A T C C G A T A C T G A G T C C G A T C A T G C G T A
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T A C G T