Information for 4-CGGTGGAAAT (Motif 24)

A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T
Reverse Opposite:
G T C A A C G T A C G T A C G T A G T C A G T C G T C A A T G C A G T C T A C G
p-value:1e-8
log p-value:-2.001e+01
Information Content per bp:1.849
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif21.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets41.5 +/- 16.6bp
Average Position of motif in Background43.3 +/- 28.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC1/MA0624.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGGTGGAAAT-
-NNTGGAAANN
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T A C G T
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CGGTGGAAAT
---TGGAAAA
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:3
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:CGGTGGAAAT-
-AATGGAAAAT
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T A C G T
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGGTGGAAAT-
-AATGGAAAAT
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T A C G T
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGGTGGAAAT-
-NATGGAAAAN
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T A C G T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CGGTGGAAAT
NACAGGAAAT
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CGGTGGAAAT-
TGGCGGGAAAHB
 A C G T A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T A C G T
C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:CGGTGGAAAT----
----GGAAATTCCC
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CGGTGGAAAT
GGCGGGAARN
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CGGTGGAAAT----
----GGAAATTCCC
 A T G C A C T G A T C G A C G T A C T G C T A G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C