Information for 12-CAGTCATTTTCTT (Motif 21)

G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A T A C G C G T A C G T A C G T A C G T A A C G T C T A G C G T A G T A C A C G T A C T G
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.905
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.6 +/- 29.5bp
Average Position of motif in Background32.6 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGTCATTTTCTT-----
-NTNAATTTTATTGNATT
 G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCATTTTCTT
GCNGCCATCTTG--
 A C G T G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CAGTCATTTTCTT
--GTCATN-----
 G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGTCATTTTCTT-
NNGTANTGTTTTNC
 G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T
G A C T C T G A C A T G C G A T G T C A T G C A G C A T A T C G G A C T G C A T G C A T G C A T A T C G T G A C

BATF::JUN/MA0462.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGTCATTTTCTT
TGAGTCATTTC---
 A C G T G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T
C G A T A C T G C G T A A T C G A C G T G T A C C G T A C A G T G C A T G A C T G A T C A C G T A C G T A C G T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAGTCATTTTCTT------
-----TTTTTTTTCNNGTN
 G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Sox6/MA0515.1/Jaspar

Match Rank:7
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CAGTCATTTTCTT
---CCATTGTTTT
 G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGTCATTTTCTT-----
--NNANTTTTATTGGNNN
 G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

JUN(var.2)/MA0489.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGTCATTTTCTT
ATGAGTCATNTNNT-
 A C G T A C G T G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T
T G C A A C G T A C T G C G T A T A C G C G A T A G T C C G T A A G C T G A T C G A C T G A T C G A T C G A C T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGTCATTTTCTT-----
-NNNNTTTTTTTTTNAAC
 G T A C C G T A A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C