Information for 8-CCTGCTGGGTTTC (Motif 15)

A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C
Reverse Opposite:
C T A G C G T A C G T A C G T A A G T C A G T C A G T C C G T A A C T G G T A C C G T A A C T G A C T G
p-value:1e-9
log p-value:-2.226e+01
Information Content per bp:1.930
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.6 +/- 13.7bp
Average Position of motif in Background41.7 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGGGTTTC
CCCCCTGCTGTG----
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGGGTTTC
TCNCCTGCTGNGNNN-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGGGTTTC
TNTCCTGCTGTGNNG-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.71
Offset:-5
Orientation:forward strand
Alignment:-----CCTGCTGGGTTTC
GGCCYCCTGCTGDGH---
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CCTGCTGGGTTTC
NNTCCTGCTGTGNNN-
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:6
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CCTGCTGGGTTTC
CCTGCTGAGH---
 A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCTGCTGGGTTTC---
------TGGTTTCAGT
 A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:8
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CCTGCTGGGTTTC------
--NNNTTGGTTTCGNTNNN
 A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CCTGCTGGGTTTC------
----TNTGGTTTCGATACN
 A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

PB0035.1_Irf5_1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCTGCTGGGTTTC-------
-----NTGGTTTCGGTTNNN
 A G T C A G T C A C G T A C T G G T A C C G A T A C T G A C T G A C T G A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T