Information for 1-AATTCAGASAGATTRG (Motif 1)

G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G
Reverse Opposite:
A G T C G A C T C G T A C G T A C G A T A T G C C G A T A T C G A C G T G T A C A C G T A C T G G T C A G C T A C A G T A C G T
p-value:1e-16
log p-value:-3.783e+01
Information Content per bp:1.731
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.7 +/- 31.8bp
Average Position of motif in Background51.4 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AATTCAGASAGATTRG
---CCAGACAG-----
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G
A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--AATTCAGASAGATTRG
CAAATCCAGACATCACA-
 A C G T A C G T G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.57
Offset:3
Orientation:reverse strand
Alignment:AATTCAGASAGATTRG
---CCAGACRSVB---
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AATTCAGASAGATTRG
ATGCCAGACN------
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:AATTCAGASAGATTRG--
-------ANAGATAAGAA
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AATTCAGASAGATTRG
---BCAGACWA-----
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T

Gata4/MA0482.1/Jaspar

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:AATTCAGASAGATTRG-
------NNGAGATAAGA
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G C T A G T A C G C G T A A C T G C G T A A C G T C G T A C T G A T A C G T C G A

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:AATTCAGASAGATTRG--------
--TTTTTAGAGATAAGAAATAAAG
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:9
Score:0.51
Offset:8
Orientation:forward strand
Alignment:AATTCAGASAGATTRG--
--------CAGATAAGGN
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G C T A A C T G C G T A A C G T C G T A C G T A T A C G T C A G T C G A

Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer

Match Rank:10
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:AATTCAGASAGATTRG-
-------NVAGATAAGR
 G T C A G C T A C G A T A C G T A G T C C G T A A C T G C G T A A T G C C G T A A T C G C G T A A C G T G A C T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C G C T A C A T G C T G A G C A T C G T A C T G A T A C G T C G A