Information for 19-ATTWCATATGMAW (Motif 38)

C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
Reverse Opposite:
C G A T A C G T C A G T A G T C C G T A A G C T C G T A A C G T A C T G G C A T C G T A C G T A C G A T
p-value:1e-7
log p-value:-1.761e+01
Information Content per bp:1.887
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.9 +/- 23.3bp
Average Position of motif in Background74.8 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bhlha15/MA0607.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:ATTWCATATGMAW
---ACATATGG--
 C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
A C G T A C G T A C G T T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T A C G T

POU4F2/MA0683.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ATTWCATATGMAW
CTCATTAATTATGCAT
 A C G T A C G T A C G T C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
A G T C G A C T T G A C T G C A A G C T G A C T C G T A C G T A C G A T G C A T C G T A C G A T C A T G G A T C C T G A G A C T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:3
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:ATTWCATATGMAW
---GHATATKCAT
 C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T

Twist2/MA0633.1/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:ATTWCATATGMAW
--NACATATGGN-
 C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
A C G T A C G T G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T A C G T

POU4F1/MA0790.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATTWCATATGMAW
CATTAATTATTCAT
 A C G T C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
G T A C C T G A A G C T G C A T G C T A G C T A G C A T G C A T C G T A C G A T C A G T G A T C C T G A A G C T

POU4F3/MA0791.1/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTWCATATGMAW
CTCATTAATTATGCAT
 A C G T A C G T A C G T C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
A G T C C A G T G T A C C T G A G A C T G C A T G C T A G C T A G C A T G C A T G C T A C G A T C A T G G A T C T C G A G A C T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ATTWCATATGMAW
ATTGCATAA----
 C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTWCATATGMAW-----
-TNNATTATGCATANNTT
 C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:9
Score:0.63
Offset:0
Orientation:forward strand
Alignment:ATTWCATATGMAW--
YATGCATATRCATRT
 C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A A C G T A C G T
G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATTWCATATGMAW
--AACATATGTT-
 C G T A A C G T A C G T C G A T A G T C C G T A A C G T C T G A A C G T A C T G G T C A C G T A C G T A
A C G T A C G T T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T A C G T