Information for 16-AMCARAGAAWTGKCAA (Motif 34)

C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G G T C A A G T C C G T A C G A T A C G T A C G T G T A C A C G T A G T C A C G T A C T G A C T G A C G T
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.889
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.5 +/- 16.0bp
Average Position of motif in Background55.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AMCARAGAAWTGKCAA---
---AAAGACCTGTCAATCC
 C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0105.1_Meis3/Jaspar

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AMCARAGAAWTGKCAA---
---AATTACCTGTCAATAC
 C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AMCARAGAAWTGKCAA---
---AACGAGCTGTCAATAC
 C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:AMCARAGAAWTGKCAA
-------ARNTGACA-
 C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

PH0104.1_Meis2/Jaspar

Match Rank:5
Score:0.57
Offset:3
Orientation:forward strand
Alignment:AMCARAGAAWTGKCAA---
---AAAGACCTGTCAATAC
 C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0170.1_Tgif2/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:AMCARAGAAWTGKCAA---
---AACTAGCTGTCAATAC
 C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PB0071.1_Sox4_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AMCARAGAAWTGKCAA
AGAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----AMCARAGAAWTGKCAA
ATAAGAACAAAGGACTA----
 A C G T A C G T A C G T A C G T A C G T C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:AMCARAGAAWTGKCAA
---ANGNAAAGGTCA-
 C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A
A C G T A C G T A C G T C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:10
Score:0.54
Offset:8
Orientation:reverse strand
Alignment:AMCARAGAAWTGKCAA
--------RHTGWCAR
 C G T A G T A C A G T C C G T A C T A G T C G A A C T G C G T A C G T A G C T A A C G T A C T G A C G T A G T C C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A