Information for 8-ACTTTGGTCA (Motif 28)

C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A
Reverse Opposite:
A C G T T C A G C T G A A G T C A T G C C G T A C T G A C G T A C A T G G C A T
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.795
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.36%
Number of Background Sequences with motif182.7
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets55.7 +/- 29.7bp
Average Position of motif in Background48.2 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:ACTTTGGTCA
AAYTAGGTCA
 C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A
G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---ACTTTGGTCA-
TATAAGTAGGTCAA
 A C G T A C G T A C G T C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A A C G T
C G A T C G T A C G A T G T C A C G T A A T C G A C G T C T G A A C T G A C T G A C G T A G T C C G T A T C G A

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACTTTGGTCA--
ACTTTCGTTTCT
 C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A A C G T A C G T
T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ACTTTGGTCA-
-CTGTGGTTTN
 C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.62
Offset:0
Orientation:forward strand
Alignment:ACTTTGGTCA
GCTGTGGTTT
 C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

HNF4G/MA0484.1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTGGTCA--
TGGACTTTGNNCTCN
 A C G T A C G T A C G T C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACTTTGGTCA---
TGGACTTTGNNCTNTG
 A C G T A C G T A C G T C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A A C G T A C G T A C G T
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACTTTGGTCA-
NNHTGTGGTTWN
 A C G T C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:ACTTTGGTCA
----AGGTCA
 C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A
A C G T A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----ACTTTGGTCA---
ATTTCCTTTGATCTATA
 A C G T A C G T A C G T A C G T C G T A G T A C C G A T A G C T C G A T A T C G C T A G A G C T A G T C G T C A A C G T A C G T A C G T
C G T A C G A T C A G T A G C T A G T C A G T C G A C T G A C T C G A T A C T G C G T A C G A T T A G C G C A T C G T A C A G T T G C A