Information for 10-TWGTAKYAACRGMARA (Motif 13)

A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
Reverse Opposite:
C G A T A G C T A C G T A C T G A G T C A G C T A C T G A C G T A C G T C T A G G T C A A C G T C G T A A G T C C G T A C G T A
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.848
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets65.2 +/- 11.8bp
Average Position of motif in Background51.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

DMRT3/MA0610.1/Jaspar

Match Rank:1
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TWGTAKYAACRGMARA
AATGTATCAAT------
 A C G T A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:2
Score:0.56
Offset:5
Orientation:forward strand
Alignment:TWGTAKYAACRGMARA
-----NHAACBGYYV-
 A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A G T C G C A T C G T A C G T A G T A C A C G T A C T G G A T C G A T C T C G A A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TWGTAKYAACRGMARA
CCGCATAGCAACGGA---
 A C G T A C G T A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.53
Offset:6
Orientation:forward strand
Alignment:TWGTAKYAACRGMARA
------AAACCGCAAA
 A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

PB0054.1_Rfx3_1/Jaspar

Match Rank:5
Score:0.53
Offset:-6
Orientation:forward strand
Alignment:------TWGTAKYAACRGMARA-
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:TWGTAKYAACRGMARA
-------AACCGANA-
 A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:TWGTAKYAACRGMARA
------YAACBGCC--
 A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:8
Score:0.51
Offset:6
Orientation:forward strand
Alignment:TWGTAKYAACRGMARA
------AAACCGCAA-
 A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TWGTAKYAACRGMARA
SCCTAGCAACAG----
 A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T A C G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TWGTAKYAACRGMARA
ADGGYAGYAGCATCT--
 A C G T A C G T C G A T A C T G A C G T C G T A A C G T A G T C G T C A C G T A A G T C C T G A A C T G G T A C C G T A T C G A C G T A
C T G A C G A T C T A G T C A G G A T C C T G A T C A G G A T C C T G A A C T G A G T C G C T A A C G T A G T C G C A T A C G T A C G T