Information for 7-CTGKCACCAGGCARAW (Motif 10)

G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
Reverse Opposite:
G C A T A G C T A G T C C A G T T C A G A G T C A G T C A C G T T A C G C A T G C A G T A C T G T G A C G T A C C G T A A C T G
p-value:1e-11
log p-value:-2.560e+01
Information Content per bp:1.718
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 26.5bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTGKCACCAGGCARAW
-TGGCACCATGCCAA-
 G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGKCACCAGGCARAW
SCTGTCARCACC-----
 A C G T G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGKCACCAGGCARAW
VGCTGWCAVB--------
 A C G T A C G T G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGKCACCAGGCARAW
WTGSCCTSAGGS----
 G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CTGKCACCAGGCARAW
ATGCCCTGAGGC----
 G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CTGKCACCAGGCARAW
GCTGTCAA---------
 A C G T G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGKCACCAGGCARAW
NTGCCCANNGGTNA--
 G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CTGKCACCAGGCARAW
CCTGTCAA---------
 A C G T G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGKCACCAGGCARAW
NTNGCCTCAGGCNNN-
 G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGKCACCAGGCARAW
NTCGCCTCAGGCAAT-
 G T A C A C G T A C T G A C T G A G T C G T C A G A T C A G T C C G T A C T A G A C T G A G T C G C T A T C A G C T G A C G T A
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T A C G T