Information for 5-ACTGTGMWTATTSARC (Motif 5)

G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
Reverse Opposite:
A C T G A G C T A C G T T A C G C G T A C G T A A G C T C G T A C G T A A C G T A T G C C G T A G T A C C G T A A C T G C A G T
p-value:1e-12
log p-value:-2.874e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 23.0bp
Average Position of motif in Background42.0 +/- 11.4bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:reverse strand
Alignment:ACTGTGMWTATTSARC
-----GAATATTCAT-
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
A C G T A C G T A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ACTGTGMWTATTSARC
-----GHATATKCAT-
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACTGTGMWTATTSARC
CTCATGAATATTCAT-
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
T A G C G A C T G A T C C G T A A C G T T C A G G T C A C G T A A C G T C G T A C G A T A C G T A G T C C G T A C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTGTGMWTATTSARC
GCTGTGGTTT------
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:ACTGTGMWTATTSARC
----TGCTGASTCAGC
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
A C G T A C G T A C G T A C G T A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTGTGMWTATTSARC
GCTGTG----------
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG/MA0659.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:ACTGTGMWTATTSARC-----
AAATTGCTGAGTCAGCATATT
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C T A C G A T G A C T T A C G G T A C G A C T C A T G G C T A A T C G C A G T G T A C C T G A C A T G A T G C C T G A G C A T C G T A G C A T G C A T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:ACTGTGMWTATTSARC------
--WNTGCTGASTCAGCANWTTY
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:ACTGTGMWTATTSARC
-CTGTGGTTTN-----
 G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACTGTGMWTATTSARC
TGCTGTGATTT------
 A C G T G T C A A G T C A C G T A C T G A C G T A T C G G T C A C G A T A C G T C T G A A C G T A C G T A T G C G T C A C T G A A G T C
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T