Information for 7-CGGGAGCTTT (Motif 28)

A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T
Reverse Opposite:
C G T A C T G A C G T A A C T G A G T C A C G T A G T C A G T C A G T C A C T G
p-value:1e-6
log p-value:-1.520e+01
Information Content per bp:1.957
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif4.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets57.5 +/- 34.2bp
Average Position of motif in Background53.6 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCTTT
-CGGAGC---
 A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T
A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCTTT
GGGCGGGACC---
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CGGGAGCTTT-
-GGGAGGACNG
 A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T A C G T
A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G

E2F4/MA0470.1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCTTT
GGGCGGGAAGG--
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CGGGAGCTTT----
NNNGTGACCTTTGNNN
 A C G T A C G T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGGAGCTTT
GGCGGGAARN--
 A C G T A C G T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T
T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T

PB0051.1_Osr2_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CGGGAGCTTT-
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

E2F6/MA0471.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGGGAGCTTT
GGGCGGGAAGG--
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T
C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGGAGCTTT----
NNNNTGACCTTTNNNN
 A C G T A C G T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0099.1_Zfp691_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CGGGAGCTTT-----
NNNNTGAGCACTGTNNG
 A C G T A C G T A G T C A C T G A C T G A C T G C G T A A C T G A G T C A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G