Information for 12-TTGAATGTTGCCCTAG (Motif 21)

A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G
Reverse Opposite:
G T A C G C A T C T G A C T A G C T A G C T A G G T A C G C T A T C G A T G A C G T C A C G A T A C G T G T A C G C T A T G C A
p-value:1e-8
log p-value:-2.022e+01
Information Content per bp:1.564
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif4.19%
Number of Background Sequences with motif491.5
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets52.2 +/- 28.2bp
Average Position of motif in Background49.0 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXC1/MA0032.2/Jaspar

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTGAATGTTGCCCTAG
----ATATTTACATA-
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G
A C G T A C G T A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TTGAATGTTGCCCTAG
---TTTGTTTACTTA-
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G
A C G T A C G T A C G T C G A T C G A T G A C T T C A G G A C T C A G T C A G T C T G A A G T C C G A T G A C T C G T A A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTGAATGTTGCCCTAG---
-----NGTTGCCATGGCAA
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTGAATGTTGCCCTAG---
-----GGTTGCCATGGCAA
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TTGAATGTTGCCCTAG
-TCCATGTTTACTTTG
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G
A C G T G A C T A G T C A T G C G C T A C G A T C T A G A C G T A C G T A C G T C T G A A G T C G C A T A G C T C G A T C A T G

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.55
Offset:5
Orientation:forward strand
Alignment:TTGAATGTTGCCCTAG-
-----TGTTTACTTAGG
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G

Spz1/MA0111.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTGAATGTTGCCCTAG
---GCTGTTACCCT--
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G
A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:TTGAATGTTGCCCTAG-
--BSNTGTTTACWYWGN
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G A C G T
A C G T A C G T A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTGAATGTTGCCCTAG
-TGACCTTTGCCCTA-
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G
A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTGAATGTTGCCCTAG
-TGACCTTTGCCCTAN
 A C G T C G A T C A T G C G T A G C T A C A G T A C T G A G C T C G A T C A T G G A T C G A T C G A T C G A C T C G T A A C T G
A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C