Information for 4-CCACTTGAGG (Motif 20)

G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G
Reverse Opposite:
G T A C A G T C A C G T A G T C G T C A C T G A A C T G C A G T A C T G C T A G
p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.847
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif99.2
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets41.8 +/- 24.2bp
Average Position of motif in Background50.9 +/- 26.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NKX2-3/MA0672.1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-CCACTTGAGG
ACCACTTGAA-
 A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.81
Offset:0
Orientation:forward strand
Alignment:CCACTTGAGG
CCACTTGAA-
 G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:3
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----CCACTTGAGG---
ATAACCACTTGAAAATT
 A C G T A C G T A C G T A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G A C G T A C G T A C G T
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T

PH0171.1_Nkx2-1/Jaspar

Match Rank:4
Score:0.75
Offset:-4
Orientation:forward strand
Alignment:----CCACTTGAGG--
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G A C G T A C G T
A G C T T C G A C T G A A T C G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G T C A G C A T G C A T

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----CCACTTGAGG--
TAAGCCACTTGAATTT
 A C G T A C G T A C G T A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-CCACTTGAGG
NSCACTYVAV-
 A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCACTTGAGG
RSCACTYRAG-
 A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:8
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----CCACTTGAGG--
TAAGCCACTTGAAATT
 A C G T A C G T A C G T A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G A C G T A C G T
G C A T C G T A C G T A C T A G T A G C G A T C G C T A G T A C A C G T G A C T T C A G C G T A T G C A G C T A G C A T G A C T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----CCACTTGAGG--
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CCACTTGAGG--
TAAGCCACTTAACATT
 A C G T A C G T A C G T A C G T G A T C A G T C G T C A A G T C G A C T A C G T A C T G C G T A C T A G A C T G A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T