Information for 11-CAGGATAATGTTGTAM (Motif 19)

G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C
Reverse Opposite:
C A G T A C G T C T G A G T A C C G T A C T G A G T A C C G T A C G A T A C G T G T C A A C G T A T G C A G T C A G C T A C T G
p-value:1e-9
log p-value:-2.124e+01
Information Content per bp:1.740
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.2 +/- 20.8bp
Average Position of motif in Background40.8 +/- 23.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGGATAATGTTGTAM
-NGGATTAN-------
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C
A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0120.1_Foxj1_2/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CAGGATAATGTTGTAM---
----GTNTTGTTGTGANNT
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G C T T A C G G A C T G C A T A C T G A C G T G A C T C T A G A G C T A C T G T G C A A G T C T C G A C G A T

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAGGATAATGTTGTAM---
---NNTTTTGTTTTGATNT
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C A T G G A C T C A G T G C A T G C A T T C A G A C G T C A G T C G A T C A G T C T A G G C T A G C A T G C T A C G A T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CAGGATAATGTTGTAM---
----ANATTTTTGCAANTN
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0062.1_Sox12_1/Jaspar

Match Rank:5
Score:0.51
Offset:4
Orientation:forward strand
Alignment:CAGGATAATGTTGTAM--
----TAATTGTTCTAAAC
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C A C G T A C G T
A C G T A C G T A C G T A C G T G A C T G C T A C G T A A C G T C G A T C T A G C G A T G A C T T G A C G C A T G T C A C G T A G C T A G T A C

NR3C2/MA0727.1/Jaspar

Match Rank:6
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGGATAATGTTGTAM--
-GGGAACATTGTGTTCCC
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C A C G T A C G T
A C G T C A T G T C A G C T A G C G T A C T G A A T G C C T G A G A C T G C A T C T A G G A C T A T C G A C G T G C A T G T A C G A T C G T A C

NR3C1/MA0113.3/Jaspar

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CAGGATAATGTTGTAM--
-NGGAACATNATGTACCC
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C A C G T A C G T
A C G T C A T G C T A G C T A G C G T A T G C A T A G C C T G A G A C T G C A T C T G A G A C T A T C G G C A T G C T A G A T C G A T C G A T C

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CAGGATAATGTTGTAM
ANCAGGATGT--------
 A C G T A C G T G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CAGGATAATGTTGTAM
------ATTGTTA---
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T

Ar/MA0007.3/Jaspar

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CAGGATAATGTTGTAM--
-GGGAACACGGTGTACCC
 G T A C C T G A C T A G A T C G G T C A A C G T G T C A C G T A A C G T A C T G A G C T A C G T A C T G A G C T G T C A G T A C A C G T A C G T
A C G T C T A G C T A G C T A G G C T A G T C A T A G C T C G A A G T C T A C G T C A G G A C T A T C G G C A T C G T A G A T C G A T C G A T C