Information for 5-RCTTATGGGCTCC (Motif 11)

T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C
Reverse Opposite:
A C T G A C T G C G T A A T C G A G T C A T G C G T A C C G T A C A G T G C T A C G T A C T A G A G C T
p-value:1e-10
log p-value:-2.394e+01
Information Content per bp:1.699
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.77%
Number of Background Sequences with motif47.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.6 +/- 28.6bp
Average Position of motif in Background50.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.70
Offset:8
Orientation:forward strand
Alignment:RCTTATGGGCTCC-
--------GCTCCG
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0133.1_Hic1_2/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:RCTTATGGGCTCC---
NNNNTTGGGCACNNCN
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C A C G T A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.63
Offset:4
Orientation:forward strand
Alignment:RCTTATGGGCTCC-
----GTGGGCCCCA
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T T A C G G A C T A C T G A C T G C T A G A T G C A G T C A G T C A G T C C T G A

E2F1/MA0024.3/Jaspar

Match Rank:4
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:RCTTATGGGCTCC---
----TTTGGCGCCAAA
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

PB0052.1_Plagl1_1/Jaspar

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:RCTTATGGGCTCC-----
--NNNGGGGCGCCCCCNN
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T T G C A C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C G A T C C T G A T G C A

NFY(CCAAT)/Promoter/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RCTTATGGGCTCC
-CCGATTGGCT--
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C
A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T A C G T

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:RCTTATGGGCTCC------
-------GGCTCYAKCAYC
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G A C T G A G T C A C G T A G T C G A T C C G T A A C T G T A G C C T G A A G C T T A G C

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RCTTATGGGCTCC-----
-NNNNTTGGCGCCGANNN
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:RCTTATGGGCTCC
-------NGCTN-
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:RCTTATGGGCTCC-----
-NNNNTTGGCGCCGANNN
 T C G A A G T C G A C T C A G T G C T A C G A T C A T G A T C G C T A G A T G C C G A T A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G