Information for 4-CAHAAGCCCATGGCCT (Motif 8)

A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T
Reverse Opposite:
C T G A T C A G T A C G G A T C A G T C T G C A A C G T C T A G A C T G A T C G T A G C C A G T C G A T C T A G A C G T C T A G
p-value:1e-10
log p-value:-2.518e+01
Information Content per bp:1.723
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif5.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.1 +/- 29.0bp
Average Position of motif in Background57.2 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CAHAAGCCCATGGCCT
----TGACCTTGACCT
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T
A C G T A C G T A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAHAAGCCCATGGCCT
----TGACCTTGACCT
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T
A C G T A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAHAAGCCCATGGCCT-
---GGGGCCGAGGCCTG
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T A C G T
A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CAHAAGCCCATGGCCT
---AAGCACATGG---
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T
A C G T A C G T A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:5
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAHAAGCCCATGGCCT
----AGCCTCAGGCA-
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CAHAAGCCCATGGCCT
----CGCCTCAGGCA-
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T
A C G T A C G T A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CAHAAGCCCATGGCCT---
------CNNTTGACCTTTG
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:8
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:CAHAAGCCCATGGCCT-
---NTGCCCTTGGGCGN
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T A C G T
A C G T A C G T A C G T G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAHAAGCCCATGGCCT
----AGCCTCAGGCA-
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T
A C G T A C G T A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CAHAAGCCCATGGCCT----
-----GACCACGCCCTTATT
 A G T C G T C A G A T C G C T A G T C A A C T G T A G C A G T C A G T C G T C A A C G T A C T G C T A G A T G C A G T C G A C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T