Information for 2-GGTGCAGCCTGGG (Motif 4)

A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G
Reverse Opposite:
T G A C A T G C G T A C G T C A C T A G A T C G A G T C C G A T A C T G T A G C C T G A T A G C A T G C
p-value:1e-11
log p-value:-2.741e+01
Information Content per bp:1.770
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.26%
Number of Background Sequences with motif272.8
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets52.5 +/- 25.4bp
Average Position of motif in Background53.7 +/- 35.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GGTGCAGCCTGGG
----CTGTCTGG-
 A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G
A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:forward strand
Alignment:GGTGCAGCCTGGG--
-----WDNCTGGGCA
 A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

Zfx/MA0146.2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGTGCAGCCTGGG
GGGGCCGAGGCCTG--
 A C G T A C G T A C G T A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T

ZNF143/MA0088.2/Jaspar

Match Rank:4
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GGTGCAGCCTGGG--
CAATGCATTGTGGGTA
 A C G T A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

PB0060.1_Smad3_1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGTGCAGCCTGGG----
NNTNNTGTCTGGNNTNG
 A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G A C G T A C G T A C G T A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGTGCAGCCTGGG
---BCAGACWA--
 A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G
A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGTGCAGCCTGGG----
--RGSMTBCTGGGAAAT
 A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGTGCAGCCTGGG
----CAGCC----
 A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGTGCAGCCTGGG
--VBSYGTCTGG-
 A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G
A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:10
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GGTGCAGCCTGGG---
-----NGCCTGAGGCN
 A T C G A T C G A G C T A T C G A G T C C G T A A C T G A T G C A G T C A C G T A C T G A T C G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G