p-value: | 1e-7 |
log p-value: | -1.769e+01 |
Information Content per bp: | 1.875 |
Number of Target Sequences with motif | 9.0 |
Percentage of Target Sequences with motif | 1.05% |
Number of Background Sequences with motif | 33.6 |
Percentage of Background Sequences with motif | 0.07% |
Average Position of motif in Targets | 47.7 +/- 25.2bp |
Average Position of motif in Background | 46.6 +/- 25.9bp |
Strand Bias (log2 ratio + to - strand density) | -1.2 |
Multiplicity (# of sites on avg that occur together) | 1.11 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer
Match Rank: | 1 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AACCCGGACC- TGACCTTGACCT |
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RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer
Match Rank: | 2 |
Score: | 0.65 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -AACCCGGACC- TGACCTTGACCT |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AACCCGGACC- -----TGACCT |
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NR2C2/MA0504.1/Jaspar
Match Rank: | 4 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AACCCGGACC--- TGACCTCTGACCCCN |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 5 |
Score: | 0.60 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | AACCCGGACC--- -----TGACCYCT |
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Hand1::Tcf3/MA0092.1/Jaspar
Match Rank: | 6 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | AACCCGGACC ATGCCAGACN |
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ELF1/MA0473.2/Jaspar
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AACCCGGACC-- AACCCGGAAGTG |
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TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AACCCGGACC-- TGACCTTTGACCTC |
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Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | AACCCGGACC --CCCCCCCC |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AACCCGGACC------- -NNNNTGACCCGGCGCG |
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