Information for 9-AAGCGTGCGG (Motif 25)

C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G
Reverse Opposite:
A G T C A G T C C T A G A G T C G T C A G A T C C T A G A G T C G A C T A G C T
p-value:1e-7
log p-value:-1.828e+01
Information Content per bp:1.850
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.52%
Number of Background Sequences with motif84.0
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets62.4 +/- 23.4bp
Average Position of motif in Background53.8 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AAGCGTGCGG
-TGCGTG---
 C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:2
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGCGTGCGG
AAGCTTG---
 C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGCGTGCGG
TTGCGTGCVA
 C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Hes1/MA1099.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-AAGCGTGCGG
NNCGCGTGNN-
 A C G T C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAGCGTGCGG
RTACGTGC--
 C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---AAGCGTGCGG----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

TFAP2A/MA0003.3/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAGCGTGCGG--
-NGCCTGAGGCN
 C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G A C G T A C G T
A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

GCM2/MA0767.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AAGCGTGCGG---
---TATGCGGGTA
 C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0024.1_Gcm1_1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAGCGTGCGG------
NNNNATGCGGGTNNNN
 C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:AAGCGTGCGG---
----TTGCGGTTT
 C T G A C T G A A C T G A G T C C T A G A C G T A C T G A G T C C T A G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T