Information for 1-GGCTGGCTTCTCC (Motif 2)

A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C
Reverse Opposite:
C A T G C T A G C T G A A T C G T G C A T C G A A C T G T A G C G T A C C T G A A C T G T A G C G T A C
p-value:1e-13
log p-value:-3.103e+01
Information Content per bp:1.768
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif2.91%
Number of Background Sequences with motif180.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets47.2 +/- 27.1bp
Average Position of motif in Background50.3 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCTGGCTTCTCC
GGTCTGGCAT----
 A C G T A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:2
Score:0.58
Offset:5
Orientation:forward strand
Alignment:GGCTGGCTTCTCC
-----GCTTCC--
 A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGCTGGCTTCTCC
CTGTCTGTCACCT--
 A C G T A C G T A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGCTGGCTTCTCC-
----CNGTCCTCCC
 A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C A C G T
A C G T A C G T A C G T A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGCTGGCTTCTCC
-NTTGGCANN---
 A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCTGGCTTCTCC
TGTCTGDCACCT--
 A C G T A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.54
Offset:2
Orientation:forward strand
Alignment:GGCTGGCTTCTCC
--TTGGCA-----
 A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GGCTGGCTTCTCC-----
--CCGTCTTCCCCCTCAC
 A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGCTGGCTTCTCC
-GCTGTG------
 A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C
A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCTGGCTTCTCC--
GYCTGGYYTNTGTCA
 A C T G A T C G A G T C A G C T A C T G A T C G A G T C A G C T A C G T A T G C A G C T A G T C G T A C A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A