Information for 17-VNNHWTBKCDMNM (Motif 21)

T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C
Reverse Opposite:
A C T G A T G C C A T G G C A T C A T G G T A C T G A C C T G A C G A T C G T A G C T A G T A C A T C G
p-value:1e-6
log p-value:-1.481e+01
Information Content per bp:1.355
Number of Target Sequences with motif198.0
Percentage of Target Sequences with motif20.86%
Number of Background Sequences with motif6457.8
Percentage of Background Sequences with motif14.83%
Average Position of motif in Targets48.1 +/- 26.5bp
Average Position of motif in Background49.6 +/- 35.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:VNNHWTBKCDMNM
--NNTTGGCANN-
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C
A C G T A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:VNNHWTBKCDMNM
---NTTGGCANN-
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C
A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:3
Score:0.57
Offset:5
Orientation:forward strand
Alignment:VNNHWTBKCDMNM--
-----TBGCACGCAA
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:VNNHWTBKCDMNM
-GGGATTGCATNN
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C
A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:VNNHWTBKCDMNM
----TTGGCA---
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C
A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:6
Score:0.55
Offset:4
Orientation:forward strand
Alignment:VNNHWTBKCDMNM--
----ATTGCACAATA
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:VNNHWTBKCDMNM
--ARNTGACA---
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C
A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:8
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:VNNHWTBKCDMNM
----NTGTCAN--
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C
A C G T A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T

ZBED1/MA0749.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:VNNHWTBKCDMNM---
---TATGTCGCGATAG
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C A C G T A C G T A C G T
A C G T A C G T A C G T G A C T T G C A C G A T C T A G A G C T A G T C C T A G A G T C T C A G C T G A A G C T G C T A C A T G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:VNNHWTBKCDMNM
---CTTGGCAA--
 T A C G C A T G C A G T G C A T C G T A G A C T A C T G A C T G G T A C C G T A G T A C T A C G T G A C
A C G T A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T