Information for 2-CTGCTGCAGCCTCCAC (Motif 8)

A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
Reverse Opposite:
A C T G G C A T A C T G A C T G G T C A A C T G A C T G A G T C C A G T A C T G A G T C C T G A A C T G A G T C G T C A A C T G
p-value:1e-11
log p-value:-2.569e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.5 +/- 19.9bp
Average Position of motif in Background54.7 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EGR1/MA0162.2/Jaspar

Match Rank:1
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CTGCTGCAGCCTCCAC-
---CCCCCGCCCCCGCC
 A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTGCTGCAGCCTCCAC
AGATGCTRCTRCCHT---
 A C G T A C G T A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGCAGCCTCCAC
AGCAGCTGCTNN------
 A C G T A C G T A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:4
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CTGCTGCAGCCTCCAC---
-----TCCGCCCCCGCATT
 A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T

ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CTGCTGCAGCCTCCAC
CAGCTGTTTCCT----
 A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
G T A C C G T A C A T G T A G C A G C T A C T G A G C T G C A T A C G T A G T C A G T C A G C T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTGCTGCAGCCTCCAC
CTCAGCAGCTGCTACTG----
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGCTGCAGCCTCCAC
CAGCTGNT--------
 A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGCAGCCTCCAC
NCAGCTGCTG-------
 A C G T A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--CTGCTGCAGCCTCCAC
AGCAGCTGCT--------
 A C G T A C G T A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CTGCTGCAGCCTCCAC
GGGGCCGAGGCCTG---
 A C G T A G T C A C G T A C T G A G T C G A C T A C T G A G T C G C T A A C T G A G T C A G T C A C G T G T A C A G T C C G T A A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T A C G T A C G T