Information for 3-GTCAGGGTCCKGA (Motif 5)

C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C G T A C A C T G A C T G C G T A A G T C A T G C A T G C A C G T A C T G C T G A A G T C
p-value:1e-12
log p-value:-2.800e+01
Information Content per bp:1.837
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.1 +/- 12.4bp
Average Position of motif in Background49.0 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HINFP/MA0131.2/Jaspar

Match Rank:1
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GTCAGGGTCCKGA-
--CAACGTCCGCGG
 C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A A C G T
A C G T A C G T A T G C T G C A T C G A A T G C A T C G A C G T A T G C A G T C A T C G A T G C C A T G A C T G

ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGGGTCCKGA
RGTTAGTGCCCY--
 A C G T C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A
C T G A C T A G A C G T G A C T G T C A A C T G A G C T A C T G A T G C G T A C G T A C A G C T A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GTCAGGGTCCKGA
-NRRGGGTCTT--
 C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A
A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

PB0077.1_Spdef_1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:forward strand
Alignment:GTCAGGGTCCKGA-----
--GTACATCCGGATTTTT
 C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

SPDEF/MA0686.1/Jaspar

Match Rank:5
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGGGTCCKGA
TACATCCGGGT-----
 A C G T A C G T A C G T C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A
G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T A C G T A C G T A C G T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GTCAGGGTCCKGA
CATGCGGGTAC---
 A C G T C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T

Esrra/MA0592.2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GTCAGGGTCCKGA
TTCAAGGTCAT--
 C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A
A C G T G A C T T A G C C T G A C T G A A C T G A C T G A C G T A T G C T C G A G C A T A C G T A C G T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:GTCAGGGTCCKGA----
-------RCCGGAARYN
 C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.51
Offset:-7
Orientation:reverse strand
Alignment:-------GTCAGGGTCCKGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGGTCCKGA
GKVTCADRTTWC---
 A C G T A C G T C T A G A G C T A G T C T G C A A T C G A T C G A C T G A C G T G T A C A G T C A C T G A C T G C G T A
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T