Information for 3-AATCCGCCGC (Motif 4)

G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C
Reverse Opposite:
A T C G T G A C C T A G A T C G A T G C C A T G C T A G C T G A G C A T C G A T
p-value:1e-12
log p-value:-2.973e+01
Information Content per bp:1.681
Number of Target Sequences with motif88.0
Percentage of Target Sequences with motif9.30%
Number of Background Sequences with motif1761.1
Percentage of Background Sequences with motif3.88%
Average Position of motif in Targets52.2 +/- 26.6bp
Average Position of motif in Background47.9 +/- 36.2bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GSC2/MA0891.1/Jaspar

Match Rank:1
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AATCCGCCGC
CCTAATCCGC---
 A C G T A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AATCCGCCGC
TTAATCCG----
 A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C
G A C T G C A T C G T A C G T A C A G T T A G C A T G C A T C G A C G T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AATCCGCCGC----
AAGCATACGCCCAACTT
 A C G T A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C A C G T A C G T A C G T A C G T
T G C A T C G A C T A G A G T C C G T A C G A T G T C A A G T C C T A G T A G C T A G C G A T C G T C A C G T A G T A C G C A T C A G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AATCCGCCGC-----
TCACCCCGCCCCAAATT
 A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

PB0179.1_Sp100_2/Jaspar

Match Rank:5
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----AATCCGCCGC-
NNTTTANNCGACGNA
 A C G T A C G T A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C A C G T
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A

PH0015.1_Crx/Jaspar

Match Rank:6
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----AATCCGCCGC-
AGGCTAATCCCCAANG
 A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C A C G T
G T C A T A C G T C A G G A T C C G A T C G T A C G T A A C G T A G T C A G T C A T G C A T G C G C T A G C T A T G A C T C A G

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AATCCGCCGC------
GGTCCCGCCCCCTTCTC
 A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C

GSC/MA0648.1/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AATCCGCCGC
GCTAATCCCC---
 A C G T A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C
T A C G G A T C A G C T C T G A C G T A A C G T A G T C A G T C A T G C G A T C A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:9
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AATCCGCCGC-
ATAGTTAATCCCCCTCA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------AATCCGCCGC-
ATAGTTAATCCCCCNNA
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A C G T A G A C T G A T C G T A C A T C G A T G C G A T C A C T G A T G C A C G T
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A