Information for 13-CCTAGCTTCCCTC (Motif 23)

A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A T C G A C T G C G T A C T G A A C T G A G T C G A C T C G T A A C T G A C T G
p-value:1e-7
log p-value:-1.729e+01
Information Content per bp:1.908
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.4 +/- 22.3bp
Average Position of motif in Background63.2 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCTAGCTTCCCTC-
CCTTCCTTCCTTCCTTCC
 A C G T A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTAGCTTCCCTC-
GYCTGGYYTNTGTCA
 A C G T A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CCTAGCTTCCCTC
----GCTTCC---
 A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CCTAGCTTCCCTC--
----NCTTCCCGCCC
 A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:CCTAGCTTCCCTC-
----NYTTCCCGCC
 A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T T A G C A G C T G A C T A G C T A T G C T G A C T A G C C A T G A T G C A T G C

PB0124.1_Gabpa_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCTAGCTTCCCTC----
-CCGTCTTCCCCCTCAC
 A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

E2F4/MA0470.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CCTAGCTTCCCTC--
----NNTTCCCGCCC
 A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:8
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:CCTAGCTTCCCTC---
------TTCCCGCCWG
 A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:9
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCTAGCTTCCCTC
TACCATAGCAACGGT-
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T

PB0159.1_Rfx4_2/Jaspar

Match Rank:10
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CCTAGCTTCCCTC
TACCCTAGTTACCGA-
 A C G T A C G T A C G T A G T C A G T C A C G T C G T A A C T G A G T C A G C T A C G T A G T C A T G C A G T C A C G T A G T C
G C A T G T C A A T G C A T G C G T A C C A G T T C G A A C T G C G A T A C G T C G T A A G T C T A G C T A C G G T C A A C G T