Information for 2-GTCCGAATAKTAK (Motif 2)

A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T
Reverse Opposite:
G T A C A C G T C G T A G T A C A C G T G T C A A C G T A C G T A T G C A C T G A T C G C T G A A G T C
p-value:1e-15
log p-value:-3.566e+01
Information Content per bp:1.841
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.74%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.1 +/- 26.6bp
Average Position of motif in Background85.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCCGAATAKTAK
NNTNNCAATATTAG
 A C G T A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTCCGAATAKTAK
NNTNNCAATATTAG
 A C G T A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:3
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:GTCCGAATAKTAK-
--GCTAAAAATAGC
 A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GTCCGAATAKTAK
GGTGCCAAGT----
 A C G T A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GTCCGAATAKTAK--
ATGCTAAAAATAGAA
 A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GTCCGAATAKTAK
---CCAAAAATAG
 A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T
A C G T A C G T A C G T G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G

PB0177.1_Sox7_2/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GTCCGAATAKTAK---------
GTGCTAATTGTGTGTGTACGCT
 A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0096.1_Zfp187_1/Jaspar

Match Rank:8
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----GTCCGAATAKTAK
TTATGTACTAATAA---
 A C G T A C G T A C G T A C G T A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A A C G T A C G T A C G T

MEF2A/MA0052.3/Jaspar

Match Rank:9
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GTCCGAATAKTAK-
--TCTAAAAATAGA
 A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A

MEF2B/MA0660.1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GTCCGAATAKTAK-
--GCTATAAATAGC
 A C T G A G C T A T G C A G T C A T C G C G T A C G T A C A G T C G T A A C T G A C G T C G T A A C G T A C G T
A C G T A C G T C T A G G T A C A G C T C G T A G C A T C G T A G C T A C G T A A C G T G C T A T C A G G T A C