Information for 8-GGGCAGAGGAGAG (Motif 15)

A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
Reverse Opposite:
G T A C A C G T A G T C A C G T A G T C A G T C A G C T A T G C G A C T A C T G A G T C A G T C A T G C
p-value:1e-9
log p-value:-2.157e+01
Information Content per bp:1.890
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 23.5bp
Average Position of motif in Background53.9 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGAGGAGAG
TAGGGCAAAGGTCA-
 A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:2
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGAGAG
GTAGGGCAAAGGTCA-
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGGCAGAGGAGAG
TGGGGCAAAGGTCA-
 A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:4
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGAGAG
AGGGGTCAGAGGTCA-
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A A C G T

THAP1/MA0597.1/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGAGGAGAG
TNNGGGCAG-------
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:6
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GGGCAGAGGAGAG
GAGGTCAAAGGTCA-
 A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGAGAG
RGKGGGCGGAGC----
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GGGCAGAGGAGAG
NNTNNGGGGCGGNGNGN--
 A C G T A C G T A C G T A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGGCAGAGGAGAG
AGGGGGCGGGGCTG--
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G A C G T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---GGGCAGAGGAGAG
NGTGGGCAT-------
 A C G T A C G T A C G T A T C G A C T G A C T G A G T C C G T A A T C G C T G A A C T G C T A G C G T A A C T G C G T A A C T G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T