Information for 8-TGCTACTGCG (Motif 12)

A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G
Reverse Opposite:
A G T C A C T G A G T C C G T A C T A G A C G T C G T A C T A G A G T C C G T A
p-value:1e-10
log p-value:-2.328e+01
Information Content per bp:1.942
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.63%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets39.3 +/- 29.7bp
Average Position of motif in Background52.3 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---TGCTACTGCG---
TNNTGCTACTGTNNNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TGCTACTGCG---
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGCTACTGCG--
AGATGCTRCTRCCHT
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TGCTACTGCG---
TNTCCTGCTGTGNNG
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--TGCTACTGCG---
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGCTACTGCG
WATGCAAATGAG
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G

PB0206.1_Zic2_2/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TGCTACTGCG---
TCNCCTGCTGNGNNN
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G A C G T A C G T A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCTACTGCG-
CTGCGCATGCGC
 A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G A C G T
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCTACTGCG
CGCAGCTGCG
 A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGCTACTGCG
TATGCWAATBAV
 A C G T A C G T A C G T A C T G A G T C A C G T C G T A A G T C A C G T A C T G A G T C A C T G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G