Information for 4-CAGMARCCAGGCH (Motif 5)

A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A
Reverse Opposite:
C G A T C T A G A G T C A T G C C G A T A C T G A C T G G A T C G A C T C A T G T A G C G A C T A T C G
p-value:1e-17
log p-value:-4.006e+01
Information Content per bp:1.565
Number of Target Sequences with motif97.0
Percentage of Target Sequences with motif11.86%
Number of Background Sequences with motif1988.3
Percentage of Background Sequences with motif4.42%
Average Position of motif in Targets49.5 +/- 26.9bp
Average Position of motif in Background49.8 +/- 32.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---CAGMARCCAGGCH
TGACANARRCCAGRC-
 A C G T A C G T A C G T A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:2
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CAGMARCCAGGCH
---ATGCCAGACN
 A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:3
Score:0.60
Offset:6
Orientation:forward strand
Alignment:CAGMARCCAGGCH---
------VCAGGTRDRY
 A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CAGMARCCAGGCH-
------CTAGGCCT
 A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAGMARCCAGGCH--
-----ANCAGGATGT
 A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CAGMARCCAGGCH
-----CACAGN--
 A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CAGMARCCAGGCH-
------CNAGGCCT
 A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CAGMARCCAGGCH-
----WDNCTGGGCA
 A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A A C G T
A C G T A C G T A C G T A C G T G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CAGMARCCAGGCH
AAGGKGRCGCAGGCA
 A C G T A C G T A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:CAGMARCCAGGCH----
--SCAGYCADGCATGAC
 A T G C C T G A A T C G G T A C C T G A C T A G T G A C T G A C C G T A A T C G C T A G G A T C G C T A A C G T A C G T A C G T A C G T
A C G T A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C