Information for 15-CCACAGGCTT (Motif 23)

A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
Reverse Opposite:
C G T A C G T A A C T G A G T C A G T C A C G T A C T G A C G T A C T G A C T G
p-value:1e-5
log p-value:-1.285e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.49%
Number of Background Sequences with motif5.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 16.3bp
Average Position of motif in Background55.0 +/- 13.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1/MA0002.2/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGCTT
AAACCACAGAN--
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGCTT
AGCCTCAGGCA-
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGCTT
CGCCTCAGGCA-
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--CCACAGGCTT
AGCCTCAGGCA-
 A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----CCACAGGCTT
NWAACCACADNN--
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----CCACAGGCTT-
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CCACAGGCTT
AAACCACAGC---
 A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCACAGGCTT
-CACAGN---
 A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCACAGGCTT
---CAAGCTT
 A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T G A T C C G T A C G T A A T C G A G T C A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CCACAGGCTT
NAAACCACAG----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A A G T C C G T A A C T G A C T G A G T C A C G T A C G T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T