Information for 12-AAACATGTCTAAT (Motif 20)

C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T
Reverse Opposite:
C G T A A C G T A G C T C G T A A C T G C G T A A G T C C G T A C G A T A C T G A G C T C G A T A C G T
p-value:1e-7
log p-value:-1.796e+01
Information Content per bp:1.921
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets48.0 +/- 22.6bp
Average Position of motif in Background61.7 +/- 18.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAACATGTCTAAT---
-ACCGTGACTAATTNN
 C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T A C G T A C G T A C G T
A C G T C G T A T A G C A G T C C T A G C A G T C T A G C T G A G T A C G C A T T C G A C G T A G C A T A G C T C T A G T C G A

PH0086.1_Irx5/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAACATGTCTAAT-
AATATACATGTAAAATT
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PH0085.1_Irx4/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AAACATGTCTAAT-
AATATACATGTAAAACA
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

PH0082.1_Irx2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---AAACATGTCTAAT-
TAAATACATGTAAAATT
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0083.1_Irx3_1/Jaspar

Match Rank:5
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAACATGTCTAAT-
AAAATACATGTAATACT
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AAACATGTCTAAT-
AATATACATGTAATATA
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAACATGTCTAAT-
AAAATACATGTAAAAAT
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

NFE2/MA0841.1/Jaspar

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AAACATGTCTAAT-
---CATGACTCATC
 C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T A C G T
A C G T A C G T A C G T T G A C T C G A G A C T A C T G G T C A T A G C A G C T G A T C T G C A A G C T A T G C

PB0141.1_Isgf3g_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AAACATGTCTAAT
GCAAAACATTACTA--
 A C G T A C G T A C G T C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T
A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A A C G T A C G T

JDP2/MA0655.1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAACATGTCTAAT
----ATGACTCAT
 C G T A C G T A C T G A A G T C C G T A A C G T A C T G A C G T A G T C A C G T C T G A C G T A A C G T
A C G T A C G T A C G T A C G T T C G A G A C T A C T G C G T A T A G C C A G T G T A C C G T A G A C T