Information for 9-RTTTSTCAAKTSA (Motif 16)

T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A G T A C A C G T A C G T A C T G C G T A T A C G C G T A C G T A C G T A A G T C
p-value:1e-8
log p-value:-1.998e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.3 +/- 18.1bp
Average Position of motif in Background38.2 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RTTTSTCAAKTSA
GTTGCGCAAT---
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A
T C A G A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A C G T A C G T A C G T A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:RTTTSTCAAKTSA----
NANTTTCAAGTGGTTAN
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0068.1_Sox1_1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RTTTSTCAAKTSA------
---AATCAATTCAATAATT
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C G T A C A G T G A T C G C T A G C T A G C A T C G A T T A G C G C T A G C T A G C A T C G T A G T C A C G A T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.58
Offset:3
Orientation:forward strand
Alignment:RTTTSTCAAKTSA
---TGTCANYT--
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A
A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:RTTTSTCAAKTSA
--NTGTCAN----
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A
A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--RTTTSTCAAKTSA-------
NTNNTNGTCACGTGACNNNTNC
 A C G T A C G T T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:7
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:RTTTSTCAAKTSA-
--BRGTCACGTGAC
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A A C G T
A C G T A C G T A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C

CEBPE/MA0837.1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RTTTSTCAAKTSA
ATTGCGCAAT---
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A
T C G A G A C T C A G T C T A G G A T C T C A G G T A C G T C A C G T A A G C T A C G T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:RTTTSTCAAKTSA
ATTGCGCAAT---
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A
T C G A G A C T C A G T C T A G G A T C T C A G G T A C T G C A G C T A A G C T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:RTTTSTCAAKTSA
-CCTGTCAA----
 T C A G A C G T A C G T A C G T A T G C A C G T A G T C G T C A C G T A A C T G A C G T A T G C C G T A
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T