p-value: | 1e-10 |
log p-value: | -2.387e+01 |
Information Content per bp: | 1.843 |
Number of Target Sequences with motif | 17.0 |
Percentage of Target Sequences with motif | 2.08% |
Number of Background Sequences with motif | 109.1 |
Percentage of Background Sequences with motif | 0.24% |
Average Position of motif in Targets | 55.9 +/- 28.8bp |
Average Position of motif in Background | 54.4 +/- 37.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.4 |
Multiplicity (# of sites on avg that occur together) | 1.07 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer
Match Rank: | 1 |
Score: | 0.91 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTAATGG TGATTGATGA |
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Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer
Match Rank: | 2 |
Score: | 0.89 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | TGATTAATGG-- TGATTRATGGCY |
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Hoxa9/MA0594.1/Jaspar
Match Rank: | 3 |
Score: | 0.87 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTAATGG- TGATTTATGGC |
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Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer
Match Rank: | 4 |
Score: | 0.83 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTAATGG-- TGATTTATGGCC |
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HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer
Match Rank: | 5 |
Score: | 0.82 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGATTAATGG-- TGATTTATGGCC |
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Hoxc9/MA0485.1/Jaspar
Match Rank: | 6 |
Score: | 0.81 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGATTAATGG-- NTGATTTATGGCC |
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HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer
Match Rank: | 7 |
Score: | 0.80 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -TGATTAATGG- ATGATKGATGRC |
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PBX1/MA0070.1/Jaspar
Match Rank: | 8 |
Score: | 0.75 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --TGATTAATGG TTTGATTGATGN |
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Hoxd8/MA0910.1/Jaspar
Match Rank: | 9 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGATTAATGG--- TAAATAATTAATGGCTA |
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PH0080.1_Hoxd8/Jaspar
Match Rank: | 10 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGATTAATGG--- TAAATAATTAATGGCTA |
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