Information for 9-GCTTGCTTTCGCC (Motif 9)

A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C
Reverse Opposite:
A T C G A C T G A T G C A C T G C G T A C G T A C G T A A C T G A T G C C G T A C G T A A C T G A G T C
p-value:1e-9
log p-value:-2.255e+01
Information Content per bp:1.935
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.0 +/- 14.7bp
Average Position of motif in Background42.3 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGCTTTCGCC--
TNNNATGATTTCNNCNN
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGCTTTCGCC
NNACTTGCCTT----
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCTTGCTTTCGCC
---TGGTTTCAGT
 A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C
A C G T A C G T A C G T G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:4
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCTTGCTTTCGCC---
NNNTTGGTTTCGNTNNN
 A C G T A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PB0124.1_Gabpa_2/Jaspar

Match Rank:5
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCTTGCTTTCGCC----
-CCGTCTTCCCCCTCAC
 A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C A C G T A C G T A C G T A C G T
A C G T T G A C A G T C C A T G A C G T G A T C G C A T G A C T G A T C A G T C A T G C G T A C G A T C A G C T T A G C T G C A G A T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---GCTTGCTTTCGCC
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:4
Orientation:forward strand
Alignment:GCTTGCTTTCGCC---
----ACTTTCACTTTC
 A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:GCTTGCTTTCGCC----
--NTGGTTTCGGTTNNN
 A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

Nr2e3/MA0164.1/Jaspar

Match Rank:9
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--GCTTGCTTTCGCC
AAGCTTG--------
 A C G T A C G T A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCTTGCTTTCGCC----
--TNAGTTTCGATTTTN
 A C T G A G T C A C G T A C G T A T C G A G T C C G A T A C G T A C G T A G T C A T C G G T A C A T G C A C G T A C G T A C G T A C G T
A C G T A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G