Information for 8-GTCAGCCACCAGG (Motif 8)

A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G
Reverse Opposite:
T G A C T A G C A C G T C T A G A C T G C G A T A C T G A T C G G T A C A C G T A T C G C G T A T G A C
p-value:1e-10
log p-value:-2.431e+01
Information Content per bp:1.784
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif42.8
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets46.9 +/- 18.4bp
Average Position of motif in Background54.9 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:1
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTCAGCCACCAGG
-BCAGACWA----
 A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GTCAGCCACCAGG
TGTCTGDCACCT--
 A C G T A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCAGCCACCAGG
--CAGCC------
 A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GTCAGCCACCAGG--------
--TGGCCACCAGGGGGCGCTA
 A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTCAGCCACCAGG
---ATCCAC----
 A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---GTCAGCCACCAGG
TGAGTCAGCA------
 A C G T A C G T A C G T A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GTCAGCCACCAGG-----------
----GCCASCAGGGGGCGCYVNNG
 A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GTCAGCCACCAGG
CTGTCTGTCACCT--
 A C G T A C G T A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GTCAGCCACCAGG---------
--TGGCCACCAGGTGGCACTNT
 A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

GLIS1/MA0735.1/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GTCAGCCACCAGG----
-AGACCCCCCACGAAGC
 A C T G G C A T A T G C C G T A A C T G A T G C A G T C G C T A A G T C A G T C C G T A A T C G A C T G A C G T A C G T A C G T A C G T
A C G T G T C A A C T G C G T A A T G C G T A C A T G C T A G C A G T C T G A C C T G A A G T C C A T G C G T A G C T A C A T G A T G C