Information for 4-GGVCTGCAGGCTGCTC (Motif 7)

A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A C T A G A G T C C T G A A C T G A G T C A G T C C G A T C T A G A G T C C G T A A T C G A C G T A G T C G T A C
p-value:1e-10
log p-value:-2.499e+01
Information Content per bp:1.829
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.2 +/- 27.4bp
Average Position of motif in Background31.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGVCTGCAGGCTGCTC
AAGGKGRCGCAGGCA----
 A C G T A C G T A C G T A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGVCTGCAGGCTGCTC
DCHCAGCAGGRGGCC-
 A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:GGVCTGCAGGCTGCTC
----ANCAGGATGT--
 A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:4
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGVCTGCAGGCTGCTC
NNNANTGCAGTGCNNTT
 A C G T A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.49
Offset:1
Orientation:forward strand
Alignment:GGVCTGCAGGCTGCTC
-CACAGCAGGGGG---
 A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:6
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGVCTGCAGGCTGCTC
GAGCACAGCAGGACA---
 A C G T A C G T A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.48
Offset:-2
Orientation:forward strand
Alignment:--GGVCTGCAGGCTGCTC
CCACACAGCAGGAGA---
 A C G T A C G T A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.48
Offset:0
Orientation:reverse strand
Alignment:GGVCTGCAGGCTGCTC
DCTCAGCAGG------
 A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:GGVCTGCAGGCTGCTC
TGCCCNGGGGCA----
 A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:10
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--GGVCTGCAGGCTGCTC
CCACACAGCAGGAGA---
 A C G T A C G T A C T G A C T G T G C A A T G C C G A T A C T G A G T C C G T A A C T G A C T G G T A C A G C T T C A G A G T C A C G T A G T C
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A A C G T A C G T A C G T